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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854464.1_cds_XP_016512562.1_25193
CDS Infomation

[gene=LOC107829625] [db_xref=GeneID:107829625] [protein=pentatricopeptide repeat-containing protein At5g09450, mitochondrial-like] [protein_id=XP_016512562.1] [location=complement(join(14904..15803,17869..18142,18241..18275))] [gbkey=CDS]
Sequence

ATGGCTGCTCGCTCCATTTTCGTCACTCTCACAAGAAAAGCTGGTGGCAGAGAAAGGAGT
CTATTCAGATCTTTTAGTTCAACAACTGAAGTTATCTATGAAGACTCCTCCTCTAACACT
GGGGAGGAAGAAAAGGGTGAAACGGGAGATGATTTAAAGAGCAGAATATTCAGTCTTAGA
GTGCCCAAAAGAAGCGCCACCAACGTGCTTCAGAAATGGGTCACTGAAGGCCGACAAGTC
TCCATCTCTGACCTCCGTCACATCTCCAAACAACTCCGCAACTCACGCAGATTCAAGCAC
GCCCTCGAGATCTCAGAATGGCTGGTTTACCACAATCAGGATGAAGCAGTGGACTCCGAC
TATGCCACCCGCATTGACTTGATGACCAAAGTTTTTGGAATTGATTCTGCTGAACGCTAT
TTTGAAGGACTTCCTACCACTGTAAAAACTACTGAAACATATACTGCTCTCCTCCACTCC
TATGCTAGTTTGGGATTAACTGACAAAGCTGAGGGCCTCTTTGAAAGAATGAAAGAAGCA
AATATTTCTCTGAGCACTATCACTTATAATGAGATGATGACTTTGTACATGTCTGTTGGA
CAGCTAGAGAAAGTACCTCTTATTGTTGAGGAGATGAAACTTCAAAAGGTTGCACCAGAC
CTATTTACTTATAATCTGTGGGTAAGTTCATGTGCTGCAGCTCTAAACATTGATGAGGTG
AGACGGATTCTTGATGAAATAAGTCTTGGCTGTGACTCTGGTGAACATTGGTTAAGATAT
AGGAATCTTGTTAAAATATATATCACCTCAGGTAACCTTGTAAACTCAGGATCAAACTCT
GTAGTTGAATCTGAGAAGGGTATCACACAAAGAGAATGGATATCATATGACTTTCTTATT
ATTCTCTATGGTGCATTGGGAAATAAAGACAAGCTTGATCAAATTTGGAAATCCTTACGG
ATGACTAATCAAAAAATGACTAGCAGAAATTATGTTTGCATACTCTCCTCATATCTCATG
CTTGGACATATGAAGGAAGTTGGAGAAATTATTGATCAGTGGAAGCAATCTGCTGCGACA
GATTTTGATAGCTCCAGCTGCAATAGACTTCTAAAGGCTTATAGCGAAGTTGGGTTGGAC
GAGAGAGCTGCAGCTTTCCAATTGCTTCTAATTCAGAAAGGCTGTGACCTTATAGATGAA
TCACAGTAG

Peptide Sequence

PEP ID

XP_016512562.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial-like [Nicotiana tabacum]
Sequence

MAARSIFVTLTRKAGGRERSLFRSFSSTTEVIYEDSSSNTGEEEKGETGDDLKSRIFSLR
VPKRSATNVLQKWVTEGRQVSISDLRHISKQLRNSRRFKHALEISEWLVYHNQDEAVDSD
YATRIDLMTKVFGIDSAERYFEGLPTTVKTTETYTALLHSYASLGLTDKAEGLFERMKEA
NISLSTITYNEMMTLYMSVGQLEKVPLIVEEMKLQKVAPDLFTYNLWVSSCAAALNIDEV
RRILDEISLGCDSGEHWLRYRNLVKIYITSGNLVNSGSNSVVESEKGITQREWISYDFLI
ILYGALGNKDKLDQIWKSLRMTNQKMTSRNYVCILSSYLMLGHMKEVGEIIDQWKQSAAT
DFDSSSCNRLLKAYSEVGLDERAAAFQLLLIQKGCDLIDESQ

Transcript Sequence

Gene sequence data has not been registered.